Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 AC068418.2-201ENST00000577309 3703 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN2P57739 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.56□□□□□ -0.08
CLDN2P57739 AC103988.2-201ENST00000561804 725 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN2P57739 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLDN2P57739 AC020922.3-201ENST00000595064 547 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 AC079336.7-201ENST00000623428 1078 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN2P57739 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.56□□□□□ -0.08
CLDN2P57739 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.56□□□□□ -0.08
CLDN2P57739 AC023157.3-201ENST00000619086 2088 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.56□□□□□ -0.08
CLDN2P57739 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.56□□□□□ -0.08
CLDN2P57739 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CLDN2P57739 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CLDN2P57739 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 AC092135.3-201ENST00000624151 1846 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 AC063926.3-201ENST00000624734 5658 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN2P57739 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN2P57739 AC007274.2-201ENST00000421675 662 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 AC078875.1-201ENST00000431907 724 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.55□□□□□ -0.08
CLDN2P57739 AC073150.1-201ENST00000450406 1084 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 RBM8B-201ENST00000555532 525 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.55□□□□□ -0.08
CLDN2P57739 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CLDN2P57739 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 TMBIM7P-202ENST00000641474 1516 ntBASIC14.55□□□□□ -0.08
CLDN2P57739 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.55□□□□□ -0.08
CLDN2P57739 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CLDN2P57739 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CLDN2P57739 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CLDN2P57739 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CLDN2P57739 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CLDN2P57739 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CLDN2P57739 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms