Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
ATXN3P54252 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.26■□□□□ 0.03
ATXN3P54252 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATXN3P54252 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
ATXN3P54252 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
ATXN3P54252 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
ATXN3P54252 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 CD8B2-202ENST00000417670 633 ntBASIC15.25■□□□□ 0.03
ATXN3P54252 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.25■□□□□ 0.03
ATXN3P54252 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 BX284668.4-201ENST00000453917 508 ntBASIC15.25■□□□□ 0.03
ATXN3P54252 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.25■□□□□ 0.03
ATXN3P54252 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.25■□□□□ 0.03
ATXN3P54252 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.25■□□□□ 0.03
ATXN3P54252 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 NDUFV2P1-201ENST00000596415 907 ntBASIC15.25■□□□□ 0.03
ATXN3P54252 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
ATXN3P54252 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
ATXN3P54252 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.25■□□□□ 0.03
ATXN3P54252 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.24■□□□□ 0.03
ATXN3P54252 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 AC018892.3-201ENST00000623986 2499 ntBASIC15.24■□□□□ 0.03
ATXN3P54252 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
ATXN3P54252 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
ATXN3P54252 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.24■□□□□ 0.03
ATXN3P54252 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
ATXN3P54252 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms