Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LIMK2P53671 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LIMK2P53671 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
LIMK2P53671 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LIMK2P53671 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 AC022137.2-201ENST00000503482 481 ntBASIC14.96□□□□□ -0.01
LIMK2P53671 AC026434.2-201ENST00000506094 1078 ntBASIC14.96□□□□□ -0.01
LIMK2P53671 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.96□□□□□ -0.01
LIMK2P53671 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC14.96□□□□□ -0.01
LIMK2P53671 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
LIMK2P53671 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.96□□□□□ -0.01
LIMK2P53671 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 AL603764.1-201ENST00000636452 321 ntBASIC14.96□□□□□ -0.01
LIMK2P53671 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LIMK2P53671 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.96□□□□□ -0.01
LIMK2P53671 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK2P53671 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK2P53671 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
LIMK2P53671 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK2P53671 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.96□□□□□ -0.02
LIMK2P53671 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
LIMK2P53671 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AC106760.1-201ENST00000508690 800 ntBASIC14.95□□□□□ -0.02
LIMK2P53671 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.95□□□□□ -0.02
LIMK2P53671 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 TECR-220ENST00000600083 1204 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
LIMK2P53671 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
LIMK2P53671 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
LIMK2P53671 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.94□□□□□ -0.02
LIMK2P53671 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
LIMK2P53671 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
LIMK2P53671 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms