Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 AC090164.2-201ENST00000611487 516 ntBASIC13.55□□□□□ -0.24
SSR4P51571 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.55□□□□□ -0.24
SSR4P51571 AC068587.8-201ENST00000641239 219 ntBASIC13.55□□□□□ -0.24
SSR4P51571 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
SSR4P51571 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.55□□□□□ -0.24
SSR4P51571 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SSR4P51571 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SSR4P51571 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
SSR4P51571 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
SSR4P51571 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
SSR4P51571 AC144831.1-201ENST00000573312 2656 ntBASIC13.55□□□□□ -0.24
SSR4P51571 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.55□□□□□ -0.24
SSR4P51571 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
SSR4P51571 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
SSR4P51571 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.54□□□□□ -0.24
SSR4P51571 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 AL157407.1-201ENST00000435784 904 ntBASIC13.54□□□□□ -0.24
SSR4P51571 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.54□□□□□ -0.24
SSR4P51571 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.54□□□□□ -0.24
SSR4P51571 RBM8B-201ENST00000555532 525 ntBASIC13.54□□□□□ -0.24
SSR4P51571 AP000346.4-201ENST00000614827 381 ntBASIC13.54□□□□□ -0.24
SSR4P51571 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 Z98259.2-201ENST00000641583 609 ntBASIC13.54□□□□□ -0.24
SSR4P51571 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
SSR4P51571 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
SSR4P51571 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.54□□□□□ -0.24
SSR4P51571 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.54□□□□□ -0.24
SSR4P51571 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
SSR4P51571 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
SSR4P51571 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC13.53□□□□□ -0.24
SSR4P51571 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.53□□□□□ -0.24
SSR4P51571 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 AC018529.2-202ENST00000611482 3087 ntBASIC13.53□□□□□ -0.24
SSR4P51571 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.53□□□□□ -0.24
SSR4P51571 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.53□□□□□ -0.24
SSR4P51571 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.53□□□□□ -0.24
SSR4P51571 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.53□□□□□ -0.24
SSR4P51571 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSR4P51571 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
SSR4P51571 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SSR4P51571 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms