Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SRP9P49458 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
SRP9P49458 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.24□□□□□ -0.29
SRP9P49458 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SRP9P49458 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.24□□□□□ -0.29
SRP9P49458 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SRP9P49458 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 MIR661-201ENST00000384842 89 ntBASIC13.23□□□□□ -0.29
SRP9P49458 RN7SL399P-201ENST00000471648 279 ntBASIC13.23□□□□□ -0.29
SRP9P49458 FAM86LP-201ENST00000478302 853 ntBASIC13.23□□□□□ -0.29
SRP9P49458 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.23□□□□□ -0.29
SRP9P49458 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.23□□□□□ -0.29
SRP9P49458 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.23□□□□□ -0.29
SRP9P49458 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.23□□□□□ -0.29
SRP9P49458 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SRP9P49458 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 NUTM2HP-201ENST00000442076 2498 ntBASIC13.23□□□□□ -0.29
SRP9P49458 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SRP9P49458 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.23□□□□□ -0.29
SRP9P49458 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.23□□□□□ -0.29
SRP9P49458 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.22□□□□□ -0.29
SRP9P49458 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 AC140912.1-201ENST00000577171 1054 ntBASIC13.22□□□□□ -0.29
SRP9P49458 AC138761.1-201ENST00000584393 385 ntBASIC13.22□□□□□ -0.29
SRP9P49458 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.22□□□□□ -0.29
SRP9P49458 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.22□□□□□ -0.29
SRP9P49458 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.22□□□□□ -0.29
SRP9P49458 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SRP9P49458 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SRP9P49458 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms