Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RN7SKP230-201ENST00000365642 335 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 FAM197Y7-201ENST00000432892 766 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 TPT1P11-201ENST00000458482 498 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC131206.1-201ENST00000538078 1211 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC138951.2-201ENST00000623455 1161 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC005089.1-201ENST00000619486 2241 ntBASIC13.22□□□□□ -0.29
CSNK1A1P48729 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.22□□□□□ -0.29
CSNK1A1P48729 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
CSNK1A1P48729 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 MRPL37P1-201ENST00000592451 1337 ntBASIC13.21□□□□□ -0.29
CSNK1A1P48729 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 KRT90P-201ENST00000549264 1064 ntBASIC13.21□□□□□ -0.29
CSNK1A1P48729 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AC244669.2-201ENST00000612320 853 ntBASIC13.21□□□□□ -0.29
CSNK1A1P48729 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 AL354989.2-201ENST00000435838 1540 ntBASIC13.21□□□□□ -0.29
CSNK1A1P48729 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
CSNK1A1P48729 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
CSNK1A1P48729 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 168.3 ms