Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.83■□□□□ 0.29
CNGA1P29973 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CNGA1P29973 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.83■□□□□ 0.29
CNGA1P29973 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.83■□□□□ 0.29
CNGA1P29973 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 AP000356.3-201ENST00000382243 753 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CNGA1P29973 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 RPSAP31-201ENST00000416648 895 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 MROH4P-201ENST00000431302 1578 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 AC091951.1-201ENST00000512854 2465 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 AC136759.1-202ENST00000530858 2194 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.83■□□□□ 0.28
CNGA1P29973 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.83■□□□□ 0.28
CNGA1P29973 AC132192.2-201ENST00000596206 1147 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 AP001065.2-201ENST00000617205 644 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 AC023157.3-201ENST00000619086 2088 ntBASIC16.83■□□□□ 0.28
CNGA1P29973 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.83■□□□□ 0.28
CNGA1P29973 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CNGA1P29973 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CNGA1P29973 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.82■□□□□ 0.28
CNGA1P29973 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CNGA1P29973 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CNGA1P29973 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 AC239868.1-201ENST00000369385 493 ntBASIC16.82■□□□□ 0.28
CNGA1P29973 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 AC079112.1-201ENST00000454972 939 ntBASIC16.82■□□□□ 0.28
CNGA1P29973 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.82■□□□□ 0.28
CNGA1P29973 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.82■□□□□ 0.28
CNGA1P29973 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC16.82■□□□□ 0.28
CNGA1P29973 AC009884.2-201ENST00000603110 324 ntBASIC16.82■□□□□ 0.28
CNGA1P29973 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.82■□□□□ 0.28
CNGA1P29973 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 AC144831.1-201ENST00000573312 2656 ntBASIC16.82■□□□□ 0.28
CNGA1P29973 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CNGA1P29973 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.82■□□□□ 0.28
CNGA1P29973 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CNGA1P29973 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CNGA1P29973 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CNGA1P29973 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms