Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC012508.2-201ENST00000567613 1472 ntBASIC14.63□□□□□ -0.07
CDH3P22223 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
CDH3P22223 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CDH3P22223 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 REXO1L4P-201ENST00000605109 1937 ntBASIC14.62□□□□□ -0.07
CDH3P22223 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 AL354989.2-201ENST00000435838 1540 ntBASIC14.62□□□□□ -0.07
CDH3P22223 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 DGCR9-201ENST00000609630 2415 ntBASIC14.62□□□□□ -0.07
CDH3P22223 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH3P22223 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH3P22223 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC14.62□□□□□ -0.07
CDH3P22223 ENPP7P14-201ENST00000621765 1040 ntBASIC14.62□□□□□ -0.07
CDH3P22223 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.62□□□□□ -0.07
CDH3P22223 AC055811.4-201ENST00000624039 1754 ntBASIC14.62□□□□□ -0.07
CDH3P22223 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CDH3P22223 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 AL157414.3-201ENST00000624276 1954 ntBASIC14.62□□□□□ -0.07
CDH3P22223 AC112693.3-201ENST00000624819 1983 ntBASIC14.62□□□□□ -0.07
CDH3P22223 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CDH3P22223 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.62□□□□□ -0.07
CDH3P22223 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.62□□□□□ -0.07
CDH3P22223 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CDH3P22223 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.61□□□□□ -0.07
CDH3P22223 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 MIR1202-201ENST00000408529 83 ntBASIC14.61□□□□□ -0.07
CDH3P22223 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.61□□□□□ -0.07
CDH3P22223 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 HLA-K-203ENST00000430151 1046 ntBASIC14.61□□□□□ -0.07
CDH3P22223 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 EIF3FP3-201ENST00000434851 1086 ntBASIC14.61□□□□□ -0.07
CDH3P22223 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC14.61□□□□□ -0.07
CDH3P22223 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 AC010328.2-201ENST00000597698 1111 ntBASIC14.61□□□□□ -0.07
CDH3P22223 AL603764.1-201ENST00000636452 321 ntBASIC14.61□□□□□ -0.07
CDH3P22223 AL033527.4-201ENST00000641026 673 ntBASIC14.61□□□□□ -0.07
CDH3P22223 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.61□□□□□ -0.07
CDH3P22223 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CDH3P22223 AC023024.2-201ENST00000623561 1993 ntBASIC14.61□□□□□ -0.07
CDH3P22223 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms