Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
RAB3BP20337 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
RAB3BP20337 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.04□□□□□ -0.32
RAB3BP20337 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 CLK3P2-201ENST00000427566 1453 ntBASIC13.04□□□□□ -0.32
RAB3BP20337 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
RAB3BP20337 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 AC090643.2-201ENST00000623442 2029 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB3BP20337 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RAB3BP20337 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 AL080243.2-201ENST00000418783 582 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 MCCD1P2-201ENST00000423228 335 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 AL450487.1-201ENST00000426799 995 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 FAM58DP-201ENST00000428076 619 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 RBPMS2P1-201ENST00000437762 623 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 AC009078.2-202ENST00000463353 338 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB3BP20337 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.03□□□□□ -0.32
RAB3BP20337 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
RAB3BP20337 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB3BP20337 MIR6074-201ENST00000612054 107 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 C20orf181-201ENST00000623918 480 ntBASIC13.03□□□□□ -0.32
RAB3BP20337 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RAB3BP20337 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.03□□□□□ -0.32
RAB3BP20337 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
RAB3BP20337 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.03□□□□□ -0.32
RAB3BP20337 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
RAB3BP20337 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.03□□□□□ -0.32
RAB3BP20337 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
RAB3BP20337 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
RAB3BP20337 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.02□□□□□ -0.32
RAB3BP20337 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC13.02□□□□□ -0.32
RAB3BP20337 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.02□□□□□ -0.32
RAB3BP20337 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 MEX3B-202ENST00000558133 4333 ntBASIC13.02□□□□□ -0.32
RAB3BP20337 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.02□□□□□ -0.32
RAB3BP20337 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
RAB3BP20337 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
RAB3BP20337 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
RAB3BP20337 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms