Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.23■□□□□ 0.03
ERCC2P18074 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 AC119751.2-201ENST00000504529 210 ntBASIC15.23■□□□□ 0.03
ERCC2P18074 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.23■□□□□ 0.03
ERCC2P18074 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.23■□□□□ 0.03
ERCC2P18074 AP006547.1-201ENST00000563435 692 ntBASIC15.23■□□□□ 0.03
ERCC2P18074 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.23■□□□□ 0.03
ERCC2P18074 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.23■□□□□ 0.03
ERCC2P18074 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.23■□□□□ 0.03
ERCC2P18074 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.23■□□□□ 0.03
ERCC2P18074 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 AL590440.2-201ENST00000641973 1595 ntBASIC15.23■□□□□ 0.03
ERCC2P18074 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC15.23■□□□□ 0.03
ERCC2P18074 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
ERCC2P18074 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
ERCC2P18074 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.22■□□□□ 0.03
ERCC2P18074 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.22■□□□□ 0.03
ERCC2P18074 AC099336.1-201ENST00000417053 1171 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 HLA-V-201ENST00000429037 534 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 AL355994.2-201ENST00000447882 704 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 CSF2RBP1-201ENST00000447905 391 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 HOMER2P2-201ENST00000451621 847 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.22■□□□□ 0.03
ERCC2P18074 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.22■□□□□ 0.03
ERCC2P18074 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.22■□□□□ 0.03
ERCC2P18074 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.22■□□□□ 0.03
ERCC2P18074 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.22■□□□□ 0.03
ERCC2P18074 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.22■□□□□ 0.03
ERCC2P18074 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
ERCC2P18074 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ERCC2P18074 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.03
ERCC2P18074 KHSRPP1-201ENST00000427983 1768 ntBASIC15.21■□□□□ 0.03
ERCC2P18074 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
ERCC2P18074 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
ERCC2P18074 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ERCC2P18074 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC15.21■□□□□ 0.03
ERCC2P18074 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
ERCC2P18074 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms