Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.34■□□□□ 0.05
H2AFXP16104 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.34■□□□□ 0.05
H2AFXP16104 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
H2AFXP16104 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.34■□□□□ 0.05
H2AFXP16104 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.34■□□□□ 0.05
H2AFXP16104 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.34■□□□□ 0.05
H2AFXP16104 AC091304.2-201ENST00000564639 760 ntBASIC15.34■□□□□ 0.05
H2AFXP16104 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC15.34■□□□□ 0.05
H2AFXP16104 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
H2AFXP16104 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC15.34■□□□□ 0.05
H2AFXP16104 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 AGAP5-202ENST00000443782 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 AGAP4-203ENST00000448048 2439 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 DMBT1P1-203ENST00000636837 4628 ntBASIC15.34■□□□□ 0.05
H2AFXP16104 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
H2AFXP16104 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC15.34■□□□□ 0.05
H2AFXP16104 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2AFXP16104 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC15.33■□□□□ 0.05
H2AFXP16104 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
H2AFXP16104 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2AFXP16104 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
H2AFXP16104 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC15.33■□□□□ 0.05
H2AFXP16104 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
H2AFXP16104 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.33■□□□□ 0.05
H2AFXP16104 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 AC003958.1-201ENST00000435883 421 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 RPL13P2-201ENST00000440687 659 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.33■□□□□ 0.04
H2AFXP16104 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.33■□□□□ 0.04
H2AFXP16104 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 TBC1D3L-201ENST00000612727 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 AF228730.6-201ENST00000641497 218 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 AC084121.3-201ENST00000641716 218 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.33■□□□□ 0.04
H2AFXP16104 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
H2AFXP16104 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
H2AFXP16104 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC15.33■□□□□ 0.04
H2AFXP16104 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
H2AFXP16104 AC102953.2-201ENST00000609755 3026 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.33■□□□□ 0.04
H2AFXP16104 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.33■□□□□ 0.04
H2AFXP16104 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC15.32■□□□□ 0.04
H2AFXP16104 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.32■□□□□ 0.04
H2AFXP16104 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC15.32■□□□□ 0.04
H2AFXP16104 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 PHF13-201ENST00000377648 3681 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
H2AFXP16104 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
H2AFXP16104 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms