Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH1P12830 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH1P12830 AC245100.3-201ENST00000441281 285 ntBASIC14.5□□□□□ -0.09
CDH1P12830 GAPDHP21-201ENST00000450301 1010 ntBASIC14.5□□□□□ -0.09
CDH1P12830 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH1P12830 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 ENPP7P14-201ENST00000621765 1040 ntBASIC14.5□□□□□ -0.09
CDH1P12830 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH1P12830 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH1P12830 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH1P12830 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH1P12830 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 ZBTB12BP-201ENST00000314232 1122 ntBASIC14.49□□□□□ -0.09
CDH1P12830 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 AC005034.1-201ENST00000426657 489 ntBASIC14.49□□□□□ -0.09
CDH1P12830 C2orf27AP3-201ENST00000434123 579 ntBASIC14.49□□□□□ -0.09
CDH1P12830 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.49□□□□□ -0.09
CDH1P12830 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 AC025279.2-201ENST00000569730 653 ntBASIC14.49□□□□□ -0.09
CDH1P12830 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH1P12830 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 AL354718.3-201ENST00000616414 581 ntBASIC14.49□□□□□ -0.09
CDH1P12830 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 CR382287.1-201ENST00000623954 586 ntBASIC14.49□□□□□ -0.09
CDH1P12830 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH1P12830 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CDH1P12830 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 AL359881.3-201ENST00000602640 1721 ntBASIC14.49□□□□□ -0.09
CDH1P12830 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CDH1P12830 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH1P12830 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH1P12830 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH1P12830 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH1P12830 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH1P12830 FTH1P14-201ENST00000482930 551 ntBASIC14.48□□□□□ -0.09
CDH1P12830 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH1P12830 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms