Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 LYPLA2-203ENST00000374503 868 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 LINC01502-203ENST00000447907 880 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC8.87□□□□□ -0.99
APOBP04114 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 AC007952.5-201ENST00000572818 1486 ntBASIC8.87□□□□□ -0.99
APOBP04114 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 SHMT1P1-201ENST00000419974 1312 ntBASIC8.87□□□□□ -0.99
APOBP04114 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 OR51A9P-201ENST00000422578 911 ntBASIC8.87□□□□□ -0.99
APOBP04114 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 AC103923.1-201ENST00000453229 1228 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC8.87□□□□□ -0.99
APOBP04114 CSTP2-201ENST00000610599 398 ntBASIC8.87□□□□□ -0.99
APOBP04114 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 RBPMSLP-201ENST00000433427 502 ntBASIC8.87□□□□□ -0.99
APOBP04114 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 AC120498.7-201ENST00000562876 330 ntBASIC8.87□□□□□ -0.99
APOBP04114 AC079414.2-201ENST00000567157 1104 ntBASIC8.87□□□□□ -0.99
APOBP04114 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC8.87□□□□□ -0.99
APOBP04114 NEK4P3-201ENST00000604859 544 ntBASIC8.87□□□□□ -0.99
APOBP04114 AL009176.1-201ENST00000607876 650 ntBASIC8.87□□□□□ -0.99
APOBP04114 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
APOBP04114 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 CFL1P6-201ENST00000400899 494 ntBASIC8.87□□□□□ -0.99
APOBP04114 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 DPY19L2P4-201ENST00000479881 442 ntBASIC8.87□□□□□ -0.99
APOBP04114 ALG1L15P-201ENST00000482834 794 ntBASIC8.87□□□□□ -0.99
APOBP04114 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
APOBP04114 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC8.87□□□□□ -0.99
APOBP04114 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 AC087072.1-201ENST00000603727 421 ntBASIC8.87□□□□□ -0.99
APOBP04114 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC8.87□□□□□ -0.99
APOBP04114 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC8.87□□□□□ -0.99
APOBP04114 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC8.86□□□□□ -0.99
APOBP04114 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AC083798.2-202ENST00000609469 553 ntTSL 4 BASIC8.86□□□□□ -0.99
APOBP04114 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 SIGLEC20P-201ENST00000595243 1311 ntBASIC8.86□□□□□ -0.99
APOBP04114 FAM226B-201ENST00000602508 1490 ntBASIC8.86□□□□□ -0.99
APOBP04114 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
APOBP04114 GOLGA8UP-201ENST00000527159 1755 ntBASIC8.86□□□□□ -0.99
APOBP04114 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
APOBP04114 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
APOBP04114 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
APOBP04114 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 GSN-206ENST00000394353 2311 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC8.86□□□□□ -0.99
APOBP04114 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC8.86□□□□□ -0.99
APOBP04114 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC8.86□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms