Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 AC009093.2-202ENST00000620513 2079 ntBASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCDC162PA2VCL2 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 AC106820.3-201ENST00000561653 397 ntBASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 AC117489.1-201ENST00000625169 3217 ntBASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCDC162PA2VCL2 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 KRT17P7-201ENST00000451704 1104 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AC007551.1-201ENST00000457394 519 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AP003171.2-201ENST00000528208 925 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AC078819.1-201ENST00000547454 765 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AC012085.1-201ENST00000548270 765 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 AC012645.4-201ENST00000610691 1061 ntBASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCDC162PA2VCL2 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 AP000593.2-201ENST00000542775 1433 ntBASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
CCDC162PA2VCL2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
CCDC162PA2VCL2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms