Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AGAP12P-201ENST00000585227 2359 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AC136604.1-202ENST00000425471 771 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 RN7SL618P-201ENST00000477850 296 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 SLC25A1P1-201ENST00000528351 927 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AC103988.2-201ENST00000561804 725 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MIR6080-201ENST00000617359 66 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MARK2P9-201ENST00000430958 1727 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MIR497HG-202ENST00000572453 3838 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 MKRN5P-201ENST00000445263 1467 ntBASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TCRBV3S1A0A5B6 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 NUS1P3-201ENST00000423502 862 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AL450487.1-201ENST00000426799 995 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AC026410.3-201ENST00000514280 936 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AC107373.2-201ENST00000607735 490 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AL391069.4-201ENST00000609583 481 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 AL158212.4-201ENST00000624062 1286 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ELL2P1-201ENST00000413990 1906 ntBASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TCRBV3S1A0A5B6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms