Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 KRT18P64-201ENST00000434946 1219 ntBASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 LINC01225-203ENST00000563550 1244 ntBASIC13.28□□□□□ -0.28
SSR3Q9UNL2 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AL121723.1-201ENST00000445194 1519 ntBASIC13.28□□□□□ -0.28
SSR3Q9UNL2 UXT-AS1-201ENST00000590504 1525 ntBASIC13.28□□□□□ -0.28
SSR3Q9UNL2 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SSR3Q9UNL2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 AC215219.1-201ENST00000400706 1817 ntBASIC13.27□□□□□ -0.28
SSR3Q9UNL2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SSR3Q9UNL2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 EMBP1-201ENST00000458200 901 ntBASIC13.27□□□□□ -0.29
SSR3Q9UNL2 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 KRT8P12-202ENST00000472924 1397 ntBASIC13.27□□□□□ -0.29
SSR3Q9UNL2 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 CLK3P2-201ENST00000427566 1453 ntBASIC13.27□□□□□ -0.29
SSR3Q9UNL2 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 MYADML-201ENST00000474610 2147 ntBASIC13.27□□□□□ -0.29
SSR3Q9UNL2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SSR3Q9UNL2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 REXO1L1P-201ENST00000379010 6598 ntBASIC13.26□□□□□ -0.29
SSR3Q9UNL2 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SSR3Q9UNL2 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms