Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC106820.3-201ENST00000561653 397 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 OR10B1P-201ENST00000601666 907 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC106872.11-201ENST00000605838 421 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC138696.2-201ENST00000607376 223 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 RHOXF1P1-202ENST00000635473 501 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 AC009093.2-202ENST00000620513 2079 ntBASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 DNAJC24-202ENST00000465995 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CUEDC1Q9NWM3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 LINC00552-201ENST00000625151 2579 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC099336.1-201ENST00000417053 1171 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 GPAA1P2-201ENST00000417923 928 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC012497.1-201ENST00000429392 575 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC026954.1-201ENST00000429771 1293 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 FAM8A4P-201ENST00000435433 1213 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC108725.1-201ENST00000495472 409 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 AL390755.1-201ENST00000623716 2027 ntBASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CUEDC1Q9NWM3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CUEDC1Q9NWM3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms