Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNU1-114P-201ENST00000365297 166 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AL139094.1-201ENST00000405549 1188 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 TPRX2P-201ENST00000535362 881 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CALM1-205ENST00000553542 877 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 DUX4L47-201ENST00000566374 394 ntBASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.57□□□□□ -0.4
HDHD3Q9BSH5 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 AC004890.2-204ENST00000481968 304 ntBASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 AL390955.2-201ENST00000603032 514 ntBASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 PRSS30P-206ENST00000641773 873 ntBASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 AC079781.4-201ENST00000641908 219 ntBASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SALL4P5-201ENST00000419001 1760 ntBASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
HDHD3Q9BSH5 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.55□□□□□ -0.4
HDHD3Q9BSH5 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms