Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AL355864.2-201ENST00000447420 863 ntBASIC13.87□□□□□ -0.19
TM9SF2Q99805 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 USP32P1-208ENST00000506594 1164 ntBASIC13.87□□□□□ -0.19
TM9SF2Q99805 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AP005482.1-201ENST00000563722 1273 ntBASIC13.87□□□□□ -0.19
TM9SF2Q99805 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AL512343.1-201ENST00000605837 169 ntBASIC13.87□□□□□ -0.19
TM9SF2Q99805 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TM9SF2Q99805 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.87□□□□□ -0.19
TM9SF2Q99805 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AC018665.1-201ENST00000622927 1362 ntBASIC13.86□□□□□ -0.19
TM9SF2Q99805 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 LBX2-201ENST00000341396 886 ntTSL 3 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 MIR658-201ENST00000385210 100 ntBASIC13.86□□□□□ -0.19
TM9SF2Q99805 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AC005229.1-201ENST00000392885 409 ntBASIC13.86□□□□□ -0.19
TM9SF2Q99805 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AC068587.3-201ENST00000526613 355 ntBASIC13.86□□□□□ -0.19
TM9SF2Q99805 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.86□□□□□ -0.19
TM9SF2Q99805 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TM9SF2Q99805 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms