Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC15.06■□□□□ 0
PHOX2BQ99453 AC244197.1-201ENST00000456494 951 ntBASIC15.06■□□□□ 0
PHOX2BQ99453 AC099542.2-201ENST00000474149 553 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 TMF1P1-201ENST00000576058 373 ntBASIC15.06■□□□□ 0
PHOX2BQ99453 AC021016.3-201ENST00000608367 477 ntBASIC15.06■□□□□ 0
PHOX2BQ99453 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 MEG3_2.1-201ENST00000611456 105 ntBASIC15.06■□□□□ 0
PHOX2BQ99453 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.06■□□□□ 0
PHOX2BQ99453 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.06■□□□□ 0
PHOX2BQ99453 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
PHOX2BQ99453 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.05■□□□□ 0
PHOX2BQ99453 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
PHOX2BQ99453 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
PHOX2BQ99453 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.05■□□□□ 0
PHOX2BQ99453 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
PHOX2BQ99453 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
PHOX2BQ99453 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC15.05■□□□□ -0
PHOX2BQ99453 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 STK16-203ENST00000409516 895 ntTSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 AQP7P5-201ENST00000428759 1049 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC15.05■□□□□ -0
PHOX2BQ99453 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.05■□□□□ -0
PHOX2BQ99453 AQP7P4-201ENST00000447083 1042 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 AQP7P2-201ENST00000453967 1041 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 MIR4683-201ENST00000579659 81 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AC055811.3-201ENST00000584952 686 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC15.05■□□□□ -0
PHOX2BQ99453 PEBP1P2-201ENST00000603980 558 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AC087392.5-201ENST00000612517 489 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AC027281.2-201ENST00000623856 713 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AQP7P3-201ENST00000624547 1041 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 AC006449.6-201ENST00000612330 2296 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 AL009178.2-201ENST00000597278 2719 ntBASIC15.05■□□□□ -0
PHOX2BQ99453 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.05■□□□□ -0
PHOX2BQ99453 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
PHOX2BQ99453 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
PHOX2BQ99453 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.04■□□□□ -0
PHOX2BQ99453 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
PHOX2BQ99453 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.04■□□□□ -0
PHOX2BQ99453 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.04■□□□□ -0
PHOX2BQ99453 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
PHOX2BQ99453 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC15.04■□□□□ -0
PHOX2BQ99453 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC15.04■□□□□ -0
PHOX2BQ99453 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.04■□□□□ -0
PHOX2BQ99453 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.04■□□□□ -0
PHOX2BQ99453 HSFY1P1-201ENST00000423928 1178 ntBASIC15.04■□□□□ -0
PHOX2BQ99453 EIF3FP3-201ENST00000434851 1086 ntBASIC15.04■□□□□ -0
PHOX2BQ99453 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC15.04■□□□□ -0
PHOX2BQ99453 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC15.04■□□□□ -0
PHOX2BQ99453 AC140125.3-202ENST00000504362 348 ntTSL 3 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms