Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
RPRD1AQ96P16 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 CICP24-201ENST00000605464 2705 ntBASIC15.27■□□□□ 0.04
RPRD1AQ96P16 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC010141.1-201ENST00000411585 623 ntBASIC15.27■□□□□ 0.04
RPRD1AQ96P16 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC108725.1-201ENST00000495472 409 ntBASIC15.27■□□□□ 0.04
RPRD1AQ96P16 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC104982.3-201ENST00000581995 514 ntBASIC15.27■□□□□ 0.04
RPRD1AQ96P16 AC005695.3-201ENST00000614522 232 ntBASIC15.27■□□□□ 0.04
RPRD1AQ96P16 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC15.27■□□□□ 0.04
RPRD1AQ96P16 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
RPRD1AQ96P16 E2F3P2-201ENST00000447755 1422 ntBASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AL591846.1-201ENST00000451736 433 ntBASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 MIR4538-201ENST00000581377 78 ntBASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.26■□□□□ 0.03
RPRD1AQ96P16 AC008825.2-201ENST00000603374 718 ntBASIC15.26■□□□□ 0.03
RPRD1AQ96P16 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms