Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AC051619.7-201ENST00000568314 623 ntBASIC13.23□□□□□ -0.29
RFT1Q96AA3 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 GPER1-207ENST00000619052 571 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 GAB1-202ENST00000262995 7981 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
RFT1Q96AA3 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
RFT1Q96AA3 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 TSEN15P1-201ENST00000423257 515 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 RPL13P2-201ENST00000440687 659 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 AC004967.1-201ENST00000453589 447 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 AC125807.1-201ENST00000483097 614 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 AC022447.6-201ENST00000515522 438 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 AL512356.2-201ENST00000546955 174 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 AC010336.2-201ENST00000564226 506 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 Z82170.1-201ENST00000625081 3192 ntBASIC13.22□□□□□ -0.29
RFT1Q96AA3 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
RFT1Q96AA3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RFT1Q96AA3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AL139400.1-201ENST00000366220 510 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AP006288.1-201ENST00000446065 395 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 DNAJB3-202ENST00000449667 1266 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RFT1Q96AA3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 KRT18P43-201ENST00000469825 1281 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.21□□□□□ -0.29
RFT1Q96AA3 AC074044.1-201ENST00000609673 707 ntBASIC13.21□□□□□ -0.29
RFT1Q96AA3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms