Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 AC232323.1-201ENST00000540724 2099 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 REXO1L5P-201ENST00000622260 2098 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 LINC00528-201ENST00000600723 2160 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AC126335.2-201ENST00000623362 4637 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AC079178.1-201ENST00000420915 656 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 EIF3FP3-201ENST00000434851 1086 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AL096828.3-201ENST00000615354 462 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 AC068587.10-201ENST00000641210 219 ntBASIC15.69■□□□□ 0.1
ATP2A3Q93084 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
ATP2A3Q93084 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC15.69■□□□□ 0.1
ATP2A3Q93084 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 ZBED1P1-201ENST00000502364 1930 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 COX5BP1-201ENST00000507622 393 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 AL023775.1-201ENST00000454907 1746 ntBASIC15.68■□□□□ 0.1
ATP2A3Q93084 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
ATP2A3Q93084 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ATP2A3Q93084 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ATP2A3Q93084 WASH3P-207ENST00000560956 1394 ntBASIC15.67■□□□□ 0.1
ATP2A3Q93084 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ATP2A3Q93084 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms