Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TNFRSF25Q93038 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 CYP4F23P-201ENST00000593402 1579 ntBASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 MTX1P1-201ENST00000440904 838 ntBASIC16.68■□□□□ 0.26
TNFRSF25Q93038 Z93015.1-201ENST00000451718 390 ntBASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AC005586.2-201ENST00000563946 837 ntBASIC16.68■□□□□ 0.26
TNFRSF25Q93038 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TNFRSF25Q93038 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AC117489.1-201ENST00000625169 3217 ntBASIC16.67■□□□□ 0.26
TNFRSF25Q93038 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 ST13P19-201ENST00000442505 1124 ntBASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AL160314.3-201ENST00000556041 767 ntBASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 AC005324.6-201ENST00000587972 613 ntBASIC16.67■□□□□ 0.26
TNFRSF25Q93038 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 GRK6P1-201ENST00000400595 1711 ntBASIC16.67■□□□□ 0.26
TNFRSF25Q93038 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TNFRSF25Q93038 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC018735.1-201ENST00000437208 1502 ntBASIC16.66■□□□□ 0.26
TNFRSF25Q93038 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.66■□□□□ 0.26
TNFRSF25Q93038 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms