Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AHCYP2-201ENST00000430630 1300 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AL354989.2-201ENST00000435838 1540 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AL136172.1-201ENST00000598590 1394 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC015656.1-201ENST00000624209 3578 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC008687.7-202ENST00000637404 953 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC117489.1-201ENST00000625169 3217 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 AC041040.2-201ENST00000622926 2899 ntBASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMARCC2Q8TAQ2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SMARCC2Q8TAQ2 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 CD8B2-202ENST00000417670 633 ntBASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AC138466.3-201ENST00000619983 221 ntBASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 PCDHA3-202ENST00000532566 4594 ntBASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.33■□□□□ 0.36
SMARCC2Q8TAQ2 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 RNA5SP412-201ENST00000516234 123 ntBASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AC103988.2-201ENST00000561804 725 ntBASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AC010328.2-201ENST00000597698 1111 ntBASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AL033527.4-201ENST00000641026 673 ntBASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 AC020910.5-201ENST00000623668 1865 ntBASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SMARCC2Q8TAQ2 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms