Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 HPGD-203ENST00000422112 805 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AL592076.1-201ENST00000424448 303 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 SERPINA7P1-201ENST00000443077 631 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AP002803.1-201ENST00000528836 498 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AL031713.1-201ENST00000564813 661 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 MIR3188-201ENST00000583494 85 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC005632.3-201ENST00000605544 308 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC007881.3-201ENST00000608897 607 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 WT1-AS_6.1-201ENST00000614919 121 ntBASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPAS3Q8IXF0 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL583805.1-201ENST00000391389 531 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL512430.1-201ENST00000392575 860 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL355334.1-201ENST00000417713 215 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 TSPY25P-201ENST00000429463 745 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AC092473.1-201ENST00000441098 221 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AP000358.1-201ENST00000456260 156 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AC136621.1-201ENST00000624017 2304 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 SSR4P1-203ENST00000599569 2260 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 DBET-201ENST00000630918 3363 ntBASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.24■□□□□ 0.03
NPAS3Q8IXF0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
NPAS3Q8IXF0 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms