Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 KRT18P36-201ENST00000411618 1276 ntBASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
UBE3BQ7Z3V4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 RN7SL769P-201ENST00000469386 295 ntBASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC090857.1-201ENST00000527400 390 ntBASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC092299.1-201ENST00000632679 757 ntBASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 AC018629.1-201ENST00000623381 1736 ntBASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
UBE3BQ7Z3V4 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 KRT8P21-201ENST00000430398 1491 ntBASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.33■□□□□ 0.53
UBE3BQ7Z3V4 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
UBE3BQ7Z3V4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms