Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AC023310.1-201ENST00000554836 735 ntBASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AKR1B10P2-201ENST00000577332 927 ntBASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 MIR4683-201ENST00000579659 81 ntBASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 KRT8P4-201ENST00000509735 1454 ntBASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.93□□□□□ -0.02
LYSMD3Q7Z3D4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 CNN2P10-201ENST00000443067 918 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 GCOM2-201ENST00000509133 1104 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 MFF-223ENST00000524634 647 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AP006547.1-201ENST00000563435 692 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 PPY2P-201ENST00000582808 702 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AP001002.2-201ENST00000625137 386 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 AC126755.1-201ENST00000525846 6405 ntBASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.92□□□□□ -0.02
LYSMD3Q7Z3D4 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LYSMD3Q7Z3D4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms