Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 HLA-V-201ENST00000429037 534 ntBASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AC023310.1-201ENST00000554836 735 ntBASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 MVK-217ENST00000639206 367 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 KRT8P28-201ENST00000433288 1390 ntBASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 HSPA7-201ENST00000445535 1927 ntBASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 AC152010.1-201ENST00000415779 2006 ntBASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PTPN20Q4JDL3 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC090505.1-201ENST00000430515 1834 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 RN7SL832P-201ENST00000607781 1756 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC010141.1-201ENST00000411585 623 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CSF2RBP1-201ENST00000447905 391 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 HOMER2P2-201ENST00000451621 847 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CICP12-201ENST00000455801 843 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 AL161772.1-201ENST00000610494 4412 ntBASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PTPN20Q4JDL3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms