Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 AC007950.2-201ENST00000615045 2347 ntBASIC17.3■□□□□ 0.36
CNTNAP1P78357 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNTNAP1P78357 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC17.3■□□□□ 0.36
CNTNAP1P78357 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 NME6-208ENST00000435684 599 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 BCL2L12P1-201ENST00000508390 733 ntBASIC17.29■□□□□ 0.36
CNTNAP1P78357 DUT-207ENST00000559416 635 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 AC006504.5-208ENST00000588784 2401 ntBASIC17.29■□□□□ 0.36
CNTNAP1P78357 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.29■□□□□ 0.36
CNTNAP1P78357 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNTNAP1P78357 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 KHSRPP1-201ENST00000427983 1768 ntBASIC17.28■□□□□ 0.36
CNTNAP1P78357 KRT18P46-201ENST00000435568 1279 ntBASIC17.28■□□□□ 0.36
CNTNAP1P78357 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 DUX4L50-201ENST00000455245 715 ntBASIC17.28■□□□□ 0.36
CNTNAP1P78357 TREHP1-201ENST00000531328 465 ntBASIC17.28■□□□□ 0.36
CNTNAP1P78357 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AC068867.1-201ENST00000559855 150 ntBASIC17.28■□□□□ 0.36
CNTNAP1P78357 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.28■□□□□ 0.36
CNTNAP1P78357 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNTNAP1P78357 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms