Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC104581.4-201ENST00000623126 3052 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 AC005912.2-201ENST00000619492 2400 ntBASIC16.71■□□□□ 0.27
EPHB4P54760 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
EPHB4P54760 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.71■□□□□ 0.27
EPHB4P54760 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
EPHB4P54760 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
EPHB4P54760 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.71■□□□□ 0.26
EPHB4P54760 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
EPHB4P54760 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC16.71■□□□□ 0.26
EPHB4P54760 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHB4P54760 PCDHA3-202ENST00000532566 4594 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHB4P54760 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EPHB4P54760 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHB4P54760 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 AL627389.1-201ENST00000413508 1182 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHB4P54760 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC16.7■□□□□ 0.26
EPHB4P54760 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHB4P54760 AC135983.4-201ENST00000564116 1262 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.7■□□□□ 0.26
EPHB4P54760 AC020922.3-201ENST00000595064 547 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 BNIP3P13-201ENST00000599968 566 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 AL805961.1-203ENST00000641078 1258 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.7■□□□□ 0.26
EPHB4P54760 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.7■□□□□ 0.26
EPHB4P54760 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
EPHB4P54760 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
EPHB4P54760 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 FGD5P1-202ENST00000614866 2498 ntBASIC16.7■□□□□ 0.26
EPHB4P54760 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHB4P54760 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.7■□□□□ 0.26
EPHB4P54760 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
EPHB4P54760 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
EPHB4P54760 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 OR2I1P-210ENST00000642037 4691 ntBASIC16.69■□□□□ 0.26
EPHB4P54760 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHB4P54760 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
EPHB4P54760 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 AL139094.1-201ENST00000405549 1188 ntBASIC16.69■□□□□ 0.26
EPHB4P54760 EIF3FP3-201ENST00000434851 1086 ntBASIC16.69■□□□□ 0.26
EPHB4P54760 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 AC098935.1-201ENST00000446057 611 ntBASIC16.69■□□□□ 0.26
EPHB4P54760 RN7SL181P-201ENST00000462921 277 ntBASIC16.69■□□□□ 0.26
EPHB4P54760 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHB4P54760 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHB4P54760 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.69■□□□□ 0.26
EPHB4P54760 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
EPHB4P54760 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.69■□□□□ 0.26
EPHB4P54760 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms