Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC25A1P53007 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC25A1P53007 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC25A1P53007 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.18□□□□□ -0.3
SLC25A1P53007 UGT1A2P-201ENST00000454886 866 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 AC093433.1-201ENST00000458048 571 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 ELK1P1-201ENST00000485699 580 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 ALG3P1-201ENST00000508806 1114 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 SERBP1P5-201ENST00000510079 1181 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 SORD2P-201ENST00000558556 1069 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.18□□□□□ -0.3
SLC25A1P53007 CHCHD2P3-201ENST00000603038 451 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 CU634019.7-201ENST00000624153 1185 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 FP236241.2-201ENST00000624906 1185 ntBASIC13.18□□□□□ -0.3
SLC25A1P53007 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SLC25A1P53007 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.18□□□□□ -0.3
SLC25A1P53007 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SLC25A1P53007 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.17□□□□□ -0.3
SLC25A1P53007 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.17□□□□□ -0.3
SLC25A1P53007 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
SLC25A1P53007 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SLC25A1P53007 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SLC25A1P53007 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.17□□□□□ -0.3
SLC25A1P53007 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 AL590440.2-201ENST00000641973 1595 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.16□□□□□ -0.3
SLC25A1P53007 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.16□□□□□ -0.3
SLC25A1P53007 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.16□□□□□ -0.3
SLC25A1P53007 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SLC25A1P53007 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms