Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
TRIM23P36406 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRIM23P36406 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.55□□□□□ -0.08
TRIM23P36406 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM23P36406 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM23P36406 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRIM23P36406 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRIM23P36406 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 SCARNA21-201ENST00000517026 139 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 AC009779.1-201ENST00000551138 283 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM23P36406 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM23P36406 RN7SL774P-201ENST00000577467 290 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 MIR3619-201ENST00000579667 83 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 AC005962.1-201ENST00000584100 773 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM23P36406 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 AC026740.1-201ENST00000607068 791 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 AC009093.10-201ENST00000641956 1442 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 AC144522.1-201ENST00000625111 1658 ntBASIC14.54□□□□□ -0.08
TRIM23P36406 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM23P36406 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM23P36406 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TRIM23P36406 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 AC136759.1-202ENST00000530858 2194 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 KRT8P28-201ENST00000433288 1390 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM23P36406 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRIM23P36406 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM23P36406 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 AC011742.3-201ENST00000439053 820 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM23P36406 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM23P36406 AC125604.1-201ENST00000496255 707 ntBASIC14.53□□□□□ -0.08
TRIM23P36406 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms