Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
HMGCLP35914 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCLP35914 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.72□□□□□ -0.05
HMGCLP35914 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.72□□□□□ -0.05
HMGCLP35914 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC14.72□□□□□ -0.05
HMGCLP35914 AC132192.2-201ENST00000596206 1147 ntBASIC14.72□□□□□ -0.05
HMGCLP35914 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGCLP35914 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HMGCLP35914 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMGCLP35914 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.72□□□□□ -0.05
HMGCLP35914 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HMGCLP35914 AC009093.10-201ENST00000641956 1442 ntBASIC14.72□□□□□ -0.05
HMGCLP35914 AC023908.3-201ENST00000564211 3047 ntBASIC14.72□□□□□ -0.05
HMGCLP35914 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
HMGCLP35914 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.72□□□□□ -0.05
HMGCLP35914 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HMGCLP35914 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HMGCLP35914 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HMGCLP35914 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGCLP35914 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGCLP35914 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.71□□□□□ -0.05
HMGCLP35914 Z93015.1-201ENST00000451718 390 ntBASIC14.71□□□□□ -0.05
HMGCLP35914 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGCLP35914 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGCLP35914 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 RN7SL560P-201ENST00000577943 264 ntBASIC14.71□□□□□ -0.05
HMGCLP35914 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HMGCLP35914 AC009955.4-201ENST00000597192 544 ntBASIC14.71□□□□□ -0.05
HMGCLP35914 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.71□□□□□ -0.05
HMGCLP35914 AC009542.2-202ENST00000619004 1067 ntBASIC14.71□□□□□ -0.05
HMGCLP35914 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HMGCLP35914 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HMGCLP35914 AC015656.1-201ENST00000624209 3578 ntBASIC14.71□□□□□ -0.05
HMGCLP35914 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGCLP35914 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
HMGCLP35914 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.71□□□□□ -0.06
HMGCLP35914 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC14.71□□□□□ -0.06
HMGCLP35914 AC215219.1-201ENST00000400706 1817 ntBASIC14.71□□□□□ -0.06
HMGCLP35914 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGCLP35914 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.71□□□□□ -0.06
HMGCLP35914 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.71□□□□□ -0.06
HMGCLP35914 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HMGCLP35914 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
HMGCLP35914 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 TUBB1P2-201ENST00000422712 1306 ntBASIC14.7□□□□□ -0.06
HMGCLP35914 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 TUBB1P1-201ENST00000503144 1300 ntBASIC14.7□□□□□ -0.06
HMGCLP35914 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HMGCLP35914 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HMGCLP35914 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
HMGCLP35914 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms