Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC004910.1-201ENST00000433493 787 ntBASIC14.87□□□□□ -0.03
VCANP13611 LINC02344-201ENST00000443576 644 ntTSL 2 BASIC14.87□□□□□ -0.03
VCANP13611 DUX4L50-201ENST00000455245 715 ntBASIC14.87□□□□□ -0.03
VCANP13611 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.87□□□□□ -0.03
VCANP13611 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
VCANP13611 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VCANP13611 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 MIR339-201ENST00000362153 94 ntBASIC14.87□□□□□ -0.03
VCANP13611 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 OR8T1P-201ENST00000421347 918 ntBASIC14.87□□□□□ -0.03
VCANP13611 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC14.87□□□□□ -0.03
VCANP13611 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
VCANP13611 AC114296.1-202ENST00000638019 771 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VCANP13611 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
VCANP13611 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.87□□□□□ -0.03
VCANP13611 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.87□□□□□ -0.03
VCANP13611 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 ALMS1P1-201ENST00000428767 921 ntBASIC14.87□□□□□ -0.03
VCANP13611 ZNF877P-201ENST00000437614 612 ntBASIC14.87□□□□□ -0.03
VCANP13611 AC133141.1-201ENST00000443015 339 ntBASIC14.87□□□□□ -0.03
VCANP13611 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC14.87□□□□□ -0.03
VCANP13611 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
VCANP13611 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VCANP13611 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 AC022080.1-201ENST00000366255 781 ntBASIC14.86□□□□□ -0.03
VCANP13611 MIR193A-201ENST00000384882 88 ntBASIC14.86□□□□□ -0.03
VCANP13611 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC14.86□□□□□ -0.03
VCANP13611 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 AGGF1P1-201ENST00000509500 2073 ntBASIC14.86□□□□□ -0.03
VCANP13611 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 AC024909.3-201ENST00000611513 2257 ntBASIC14.86□□□□□ -0.03
VCANP13611 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC14.86□□□□□ -0.03
VCANP13611 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.86□□□□□ -0.03
VCANP13611 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.86□□□□□ -0.03
VCANP13611 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.86□□□□□ -0.03
VCANP13611 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
VCANP13611 AC000078.1-201ENST00000420617 682 ntBASIC14.86□□□□□ -0.03
VCANP13611 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC14.86□□□□□ -0.03
VCANP13611 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC14.86□□□□□ -0.03
VCANP13611 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC14.86□□□□□ -0.03
VCANP13611 CES1P2-201ENST00000566467 1242 ntBASIC14.86□□□□□ -0.03
VCANP13611 AL021707.6-201ENST00000609212 491 ntBASIC14.86□□□□□ -0.03
VCANP13611 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.86□□□□□ -0.03
VCANP13611 AC103702.1-201ENST00000548801 2630 ntBASIC14.86□□□□□ -0.03
VCANP13611 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
VCANP13611 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCANP13611 AL121753.2-201ENST00000624581 1461 ntBASIC14.85□□□□□ -0.03
VCANP13611 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
VCANP13611 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC14.85□□□□□ -0.03
VCANP13611 AC005722.1-201ENST00000431878 964 ntBASIC14.85□□□□□ -0.03
VCANP13611 NRADDP-201ENST00000437305 691 ntBASIC14.85□□□□□ -0.03
VCANP13611 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC14.85□□□□□ -0.03
VCANP13611 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC14.85□□□□□ -0.03
VCANP13611 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC14.85□□□□□ -0.03
VCANP13611 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC14.85□□□□□ -0.03
VCANP13611 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC14.85□□□□□ -0.03
VCANP13611 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
VCANP13611 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCANP13611 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
VCANP13611 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms