Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
CD28P10747 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CD28P10747 AC092506.1-202ENST00000401022 528 ntBASIC11.62□□□□□ -0.55
CD28P10747 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC11.62□□□□□ -0.55
CD28P10747 AC011742.3-201ENST00000439053 820 ntBASIC11.62□□□□□ -0.55
CD28P10747 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 TUBB8P8-201ENST00000458717 1058 ntBASIC11.62□□□□□ -0.55
CD28P10747 OARD1-204ENST00000464633 717 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC11.62□□□□□ -0.55
CD28P10747 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 AC022217.1-201ENST00000521069 738 ntBASIC11.62□□□□□ -0.55
CD28P10747 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 FOS-206ENST00000555347 1280 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC11.62□□□□□ -0.55
CD28P10747 AC013355.1-201ENST00000562625 723 ntBASIC11.62□□□□□ -0.55
CD28P10747 RN7SL163P-201ENST00000583100 276 ntBASIC11.62□□□□□ -0.55
CD28P10747 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC11.62□□□□□ -0.55
CD28P10747 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CD28P10747 AL162426.1-201ENST00000624141 743 ntBASIC11.62□□□□□ -0.55
CD28P10747 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC11.62□□□□□ -0.55
CD28P10747 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 SHC1P1-201ENST00000425230 1745 ntBASIC11.62□□□□□ -0.55
CD28P10747 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 LILRP1-201ENST00000444199 1370 ntBASIC11.62□□□□□ -0.55
CD28P10747 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
CD28P10747 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC11.62□□□□□ -0.55
CD28P10747 API5-202ENST00000420461 2009 ntTSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CD28P10747 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
CD28P10747 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
CD28P10747 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
CD28P10747 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
CD28P10747 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 RN7SKP230-201ENST00000365642 335 ntBASIC11.61□□□□□ -0.55
CD28P10747 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.61□□□□□ -0.55
CD28P10747 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 IMP3P2-201ENST00000489760 475 ntBASIC11.61□□□□□ -0.55
CD28P10747 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC11.61□□□□□ -0.55
CD28P10747 CHMP4BP1-201ENST00000556017 588 ntBASIC11.61□□□□□ -0.55
CD28P10747 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
CD28P10747 RN7SL774P-201ENST00000577467 290 ntBASIC11.61□□□□□ -0.55
CD28P10747 MIR3619-201ENST00000579667 83 ntBASIC11.61□□□□□ -0.55
CD28P10747 MIR4783-201ENST00000580343 82 ntBASIC11.61□□□□□ -0.55
CD28P10747 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.61□□□□□ -0.55
CD28P10747 AC026740.1-201ENST00000607068 791 ntBASIC11.61□□□□□ -0.55
CD28P10747 AC097724.1-201ENST00000609581 426 ntBASIC11.61□□□□□ -0.55
CD28P10747 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
CD28P10747 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
CD28P10747 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC11.61□□□□□ -0.55
CD28P10747 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms