Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.45□□□□□ -0.26
FREM3P0C091 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.45□□□□□ -0.26
FREM3P0C091 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.45□□□□□ -0.26
FREM3P0C091 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC13.45□□□□□ -0.26
FREM3P0C091 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
FREM3P0C091 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 AC015818.8-201ENST00000587907 1519 ntBASIC13.44□□□□□ -0.26
FREM3P0C091 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
FREM3P0C091 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
FREM3P0C091 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.44□□□□□ -0.26
FREM3P0C091 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.44□□□□□ -0.26
FREM3P0C091 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 AL160314.3-201ENST00000556041 767 ntBASIC13.44□□□□□ -0.26
FREM3P0C091 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.44□□□□□ -0.26
FREM3P0C091 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.44□□□□□ -0.26
FREM3P0C091 AC009955.4-201ENST00000597192 544 ntBASIC13.44□□□□□ -0.26
FREM3P0C091 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.44□□□□□ -0.26
FREM3P0C091 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.44□□□□□ -0.26
FREM3P0C091 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
FREM3P0C091 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.44□□□□□ -0.26
FREM3P0C091 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.43□□□□□ -0.26
FREM3P0C091 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
FREM3P0C091 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 AC004898.1-201ENST00000451057 766 ntBASIC13.43□□□□□ -0.26
FREM3P0C091 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.43□□□□□ -0.26
FREM3P0C091 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 RN7SL574P-201ENST00000581512 297 ntBASIC13.43□□□□□ -0.26
FREM3P0C091 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.43□□□□□ -0.26
FREM3P0C091 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.43□□□□□ -0.26
FREM3P0C091 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
FREM3P0C091 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.43□□□□□ -0.26
FREM3P0C091 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
FREM3P0C091 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
FREM3P0C091 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.43□□□□□ -0.26
FREM3P0C091 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms