Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 AC073911.3-201ENST00000624401 631 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.55■□□□□ 0.24
HOXC6P09630 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 AC006486.2-201ENST00000624246 2199 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 AC046158.3-201ENST00000624947 2558 ntBASIC16.55■□□□□ 0.24
HOXC6P09630 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
HOXC6P09630 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HOXC6P09630 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.55■□□□□ 0.24
HOXC6P09630 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
HOXC6P09630 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 LINC01101-201ENST00000622953 1884 ntBASIC16.54■□□□□ 0.24
HOXC6P09630 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.54■□□□□ 0.24
HOXC6P09630 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 AC090502.4-201ENST00000551714 1386 ntBASIC16.54■□□□□ 0.24
HOXC6P09630 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
HOXC6P09630 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
HOXC6P09630 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 AP003398.1-201ENST00000531124 318 ntBASIC16.54■□□□□ 0.24
HOXC6P09630 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.54■□□□□ 0.24
HOXC6P09630 AC107464.3-201ENST00000609172 737 ntBASIC16.54■□□□□ 0.24
HOXC6P09630 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXC6P09630 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXC6P09630 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.54■□□□□ 0.24
HOXC6P09630 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.54■□□□□ 0.24
HOXC6P09630 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.54■□□□□ 0.24
HOXC6P09630 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HOXC6P09630 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC16.54■□□□□ 0.24
HOXC6P09630 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
HOXC6P09630 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXC6P09630 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.53■□□□□ 0.24
HOXC6P09630 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.53■□□□□ 0.24
HOXC6P09630 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 AC091951.1-201ENST00000512854 2465 ntBASIC16.53■□□□□ 0.24
HOXC6P09630 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 ST13P19-201ENST00000442505 1124 ntBASIC16.53■□□□□ 0.24
HOXC6P09630 AL354861.1-201ENST00000445213 355 ntBASIC16.53■□□□□ 0.24
HOXC6P09630 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.53■□□□□ 0.24
HOXC6P09630 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.53■□□□□ 0.24
HOXC6P09630 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.53■□□□□ 0.24
HOXC6P09630 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC16.53■□□□□ 0.24
HOXC6P09630 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HOXC6P09630 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
HOXC6P09630 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.53■□□□□ 0.24
HOXC6P09630 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms