Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
SPTA1P02549 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 AC007292.2-201ENST00000593524 1812 ntBASIC13.38□□□□□ -0.27
SPTA1P02549 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.38□□□□□ -0.27
SPTA1P02549 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
SPTA1P02549 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 AL157407.1-201ENST00000435784 904 ntBASIC13.38□□□□□ -0.27
SPTA1P02549 RPSAP15-201ENST00000448168 861 ntBASIC13.38□□□□□ -0.27
SPTA1P02549 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.38□□□□□ -0.27
SPTA1P02549 AC009093.2-201ENST00000563477 546 ntTSL 4 BASIC13.38□□□□□ -0.27
SPTA1P02549 RPS5-204ENST00000598098 536 ntTSL 2 BASIC13.38□□□□□ -0.27
SPTA1P02549 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC13.38□□□□□ -0.27
SPTA1P02549 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
SPTA1P02549 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 AC127383.1-201ENST00000444697 1800 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 REXO1L4P-201ENST00000605109 1937 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 AC018629.1-201ENST00000623381 1736 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
SPTA1P02549 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.37□□□□□ -0.27
SPTA1P02549 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 AC026191.1-204ENST00000517846 608 ntTSL 3 BASIC13.37□□□□□ -0.27
SPTA1P02549 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.37□□□□□ -0.27
SPTA1P02549 MIR2392-201ENST00000584881 84 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 AP005264.6-204ENST00000588436 719 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC13.37□□□□□ -0.27
SPTA1P02549 AL451007.2-201ENST00000632004 563 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.37□□□□□ -0.27
SPTA1P02549 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 AC090502.4-201ENST00000551714 1386 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 AC025183.3-201ENST00000623526 1482 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC13.37□□□□□ -0.27
SPTA1P02549 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
SPTA1P02549 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC13.37□□□□□ -0.27
SPTA1P02549 NEU3-207ENST00000534628 746 ntTSL 2 BASIC13.37□□□□□ -0.27
SPTA1P02549 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC13.37□□□□□ -0.27
SPTA1P02549 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
SPTA1P02549 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms