Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.44□□□□□ -0.1
LDLRP01130 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.44□□□□□ -0.1
LDLRP01130 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.44□□□□□ -0.1
LDLRP01130 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.44□□□□□ -0.1
LDLRP01130 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 AC103810.3-201ENST00000583567 96 ntBASIC14.44□□□□□ -0.1
LDLRP01130 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LDLRP01130 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.44□□□□□ -0.1
LDLRP01130 MIR8072-201ENST00000614241 80 ntBASIC14.44□□□□□ -0.1
LDLRP01130 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
LDLRP01130 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LDLRP01130 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.44□□□□□ -0.1
LDLRP01130 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LDLRP01130 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 AC011474.4-201ENST00000623523 2076 ntBASIC14.43□□□□□ -0.1
LDLRP01130 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.43□□□□□ -0.1
LDLRP01130 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.43□□□□□ -0.1
LDLRP01130 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 AL355994.2-201ENST00000447882 704 ntBASIC14.43□□□□□ -0.1
LDLRP01130 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.43□□□□□ -0.1
LDLRP01130 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.43□□□□□ -0.1
LDLRP01130 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.43□□□□□ -0.1
LDLRP01130 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.43□□□□□ -0.1
LDLRP01130 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.43□□□□□ -0.1
LDLRP01130 AC010319.3-201ENST00000597028 470 ntBASIC14.43□□□□□ -0.1
LDLRP01130 AC026979.3-201ENST00000607315 403 ntBASIC14.43□□□□□ -0.1
LDLRP01130 AC244093.1-201ENST00000610837 814 ntBASIC14.43□□□□□ -0.1
LDLRP01130 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LDLRP01130 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
LDLRP01130 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 AC012508.2-201ENST00000567613 1472 ntBASIC14.43□□□□□ -0.1
LDLRP01130 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.43□□□□□ -0.1
LDLRP01130 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 MST1P2-201ENST00000457982 2291 ntBASIC14.43□□□□□ -0.1
LDLRP01130 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.43□□□□□ -0.1
LDLRP01130 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
LDLRP01130 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.42□□□□□ -0.1
LDLRP01130 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms