Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE3O75131 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 AC244157.2-201ENST00000616239 1006 ntBASIC14.34□□□□□ -0.11
CPNE3O75131 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CPNE3O75131 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CPNE3O75131 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.34□□□□□ -0.11
CPNE3O75131 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CPNE3O75131 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CPNE3O75131 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CPNE3O75131 REXO1L5P-201ENST00000622260 2098 ntBASIC14.34□□□□□ -0.11
CPNE3O75131 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
CPNE3O75131 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CPNE3O75131 AC090616.6-203ENST00000579186 1945 ntBASIC14.33□□□□□ -0.11
CPNE3O75131 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CPNE3O75131 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 NAT9-222ENST00000583476 583 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.33□□□□□ -0.12
CPNE3O75131 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.33□□□□□ -0.12
CPNE3O75131 AL096828.3-201ENST00000615354 462 ntBASIC14.33□□□□□ -0.12
CPNE3O75131 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.33□□□□□ -0.12
CPNE3O75131 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 AL360270.3-201ENST00000609118 1348 ntBASIC14.33□□□□□ -0.12
CPNE3O75131 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CPNE3O75131 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CPNE3O75131 CICP11-201ENST00000434745 2827 ntBASIC14.33□□□□□ -0.12
CPNE3O75131 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 AC126335.2-201ENST00000623362 4637 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CPNE3O75131 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE3O75131 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 MIR663B-201ENST00000408361 115 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.32□□□□□ -0.12
CPNE3O75131 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.32□□□□□ -0.12
CPNE3O75131 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.32□□□□□ -0.12
CPNE3O75131 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CPNE3O75131 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.32□□□□□ -0.12
CPNE3O75131 POM121L10P-201ENST00000436994 1285 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms