Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP2AO43633 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.68■□□□□ 0.26
CHMP2AO43633 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.68■□□□□ 0.26
CHMP2AO43633 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.68■□□□□ 0.26
CHMP2AO43633 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.68■□□□□ 0.26
CHMP2AO43633 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 GPR182-203ENST00000622922 591 ntBASIC16.68■□□□□ 0.26
CHMP2AO43633 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CHMP2AO43633 AC018735.1-201ENST00000437208 1502 ntBASIC16.68■□□□□ 0.26
CHMP2AO43633 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CHMP2AO43633 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 AC092135.3-201ENST00000624151 1846 ntBASIC16.68■□□□□ 0.26
CHMP2AO43633 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CHMP2AO43633 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CHMP2AO43633 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP2AO43633 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
CHMP2AO43633 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 AC106881.1-201ENST00000605849 3329 ntBASIC16.67■□□□□ 0.26
CHMP2AO43633 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CHMP2AO43633 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 MIR663B-201ENST00000408361 115 ntBASIC16.67■□□□□ 0.26
CHMP2AO43633 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.67■□□□□ 0.26
CHMP2AO43633 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP2AO43633 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.67■□□□□ 0.26
CHMP2AO43633 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP2AO43633 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.67■□□□□ 0.26
CHMP2AO43633 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
CHMP2AO43633 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP2AO43633 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.67■□□□□ 0.26
CHMP2AO43633 OR2I1P-210ENST00000642037 4691 ntBASIC16.67■□□□□ 0.26
CHMP2AO43633 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CHMP2AO43633 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CHMP2AO43633 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
CHMP2AO43633 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.66■□□□□ 0.26
CHMP2AO43633 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.66■□□□□ 0.26
CHMP2AO43633 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 AL354877.1-201ENST00000424412 413 ntBASIC16.66■□□□□ 0.26
CHMP2AO43633 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 AC099548.2-209ENST00000480264 625 ntBASIC16.66■□□□□ 0.26
CHMP2AO43633 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.66■□□□□ 0.26
CHMP2AO43633 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CHMP2AO43633 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.66■□□□□ 0.26
CHMP2AO43633 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.66■□□□□ 0.26
CHMP2AO43633 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms