Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 OR52V1P-201ENST00000515557 898 ntBASIC24.55■■□□□ 1.52
CUX2O14529 TNNI1-205ENST00000555948 580 ntTSL 5 BASIC24.55■■□□□ 1.52
CUX2O14529 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC24.55■■□□□ 1.52
CUX2O14529 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC24.55■■□□□ 1.52
CUX2O14529 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC24.55■■□□□ 1.52
CUX2O14529 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC24.55■■□□□ 1.52
CUX2O14529 AC048382.6-201ENST00000621980 1223 ntBASIC24.55■■□□□ 1.52
CUX2O14529 CES3-203ENST00000543856 3178 ntTSL 2 BASIC24.55■■□□□ 1.52
CUX2O14529 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC24.55■■□□□ 1.52
CUX2O14529 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CUX2O14529 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CUX2O14529 AC106785.2-201ENST00000564385 1319 ntBASIC24.55■■□□□ 1.52
CUX2O14529 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC24.55■■□□□ 1.52
CUX2O14529 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC24.55■■□□□ 1.52
CUX2O14529 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 AL365181.1-201ENST00000564032 1828 ntBASIC24.54■■□□□ 1.52
CUX2O14529 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CUX2O14529 IGHV3-66-201ENST00000390632 427 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CUX2O14529 AL627095.1-201ENST00000414775 321 ntBASIC24.54■■□□□ 1.52
CUX2O14529 AL359853.1-202ENST00000415218 544 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 AC131235.2-201ENST00000445553 1057 ntBASIC24.54■■□□□ 1.52
CUX2O14529 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC24.54■■□□□ 1.52
CUX2O14529 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC24.54■■□□□ 1.52
CUX2O14529 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC24.54■■□□□ 1.52
CUX2O14529 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 GRAMD4P6-201ENST00000556999 244 ntBASIC24.54■■□□□ 1.52
CUX2O14529 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC24.54■■□□□ 1.52
CUX2O14529 AC106782.5-201ENST00000616011 337 ntBASIC24.54■■□□□ 1.52
CUX2O14529 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC24.54■■□□□ 1.52
CUX2O14529 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC24.54■■□□□ 1.52
CUX2O14529 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC24.54■■□□□ 1.52
CUX2O14529 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC24.54■■□□□ 1.52
CUX2O14529 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC24.54■■□□□ 1.52
CUX2O14529 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC24.54■■□□□ 1.52
CUX2O14529 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CUX2O14529 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CUX2O14529 BANP-204ENST00000393208 2283 ntTSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CUX2O14529 AIG1-203ENST00000367596 559 ntTSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 UCN3-201ENST00000380433 1200 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 FTH1P18-201ENST00000412071 549 ntBASIC24.53■■□□□ 1.52
CUX2O14529 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC24.53■■□□□ 1.52
CUX2O14529 AC133141.1-201ENST00000443015 339 ntBASIC24.53■■□□□ 1.52
CUX2O14529 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC24.53■■□□□ 1.52
CUX2O14529 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC24.53■■□□□ 1.52
CUX2O14529 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CUX2O14529 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 STRN-202ENST00000379213 2254 ntTSL 5 BASIC24.53■■□□□ 1.52
CUX2O14529 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC24.53■■□□□ 1.52
CUX2O14529 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CUX2O14529 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC24.52■■□□□ 1.52
CUX2O14529 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC24.52■■□□□ 1.52
CUX2O14529 ASS1P1-201ENST00000402854 1237 ntBASIC24.52■■□□□ 1.52
CUX2O14529 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC24.52■■□□□ 1.52
CUX2O14529 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CUX2O14529 AP005264.5-201ENST00000590066 467 ntBASIC24.52■■□□□ 1.52
CUX2O14529 BCAS4-206ENST00000609336 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC24.52■■□□□ 1.52
CUX2O14529 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
CUX2O14529 AP002353.1-201ENST00000528257 1599 ntBASIC24.52■■□□□ 1.52
CUX2O14529 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC24.52■■□□□ 1.52
CUX2O14529 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 TRMT11-202ENST00000368332 1889 ntAPPRIS ALT1 TSL 2 BASIC24.52■■□□□ 1.52
CUX2O14529 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 RPL13AP3-202ENST00000494676 1473 ntBASIC24.52■■□□□ 1.52
CUX2O14529 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CUX2O14529 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC24.52■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms