Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 NUP62-208ENST00000596217 3590 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC004945.1-201ENST00000416738 983 ntBASIC10.53□□□□□ -0.72
TMEM238C9JI98 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 KRT18P35-201ENST00000510488 1269 ntBASIC10.53□□□□□ -0.72
TMEM238C9JI98 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 MTDHP3-201ENST00000594186 672 ntBASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 APLP2-202ENST00000278756 3687 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 GRID2-201ENST00000282020 6117 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.53□□□□□ -0.72
TMEM238C9JI98 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 SLC33A1-201ENST00000359479 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
TMEM238C9JI98 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 CMIP-203ENST00000539778 3937 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 UGT3A1-203ENST00000503189 1902 ntTSL 2 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 LDLRAD4-201ENST00000359446 8486 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
TMEM238C9JI98 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
TMEM238C9JI98 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 SZRD1-201ENST00000401088 3636 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC106795.1-205ENST00000512851 1056 ntBASIC10.52□□□□□ -0.73
TMEM238C9JI98 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
TMEM238C9JI98 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 MIR3909-201ENST00000579518 119 ntBASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AL139288.1-201ENST00000623748 933 ntBASIC10.52□□□□□ -0.73
TMEM238C9JI98 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC10.52□□□□□ -0.73
TMEM238C9JI98 AC018892.3-201ENST00000623986 2499 ntBASIC10.52□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms