Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC100827.2-201ENST00000563214 1194 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC005586.2-201ENST00000563946 837 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL096828.3-201ENST00000615354 462 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC012617.1-204ENST00000586340 2305 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC027601.5-201ENST00000624065 2482 ntBASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TRBV5-4A0A0C4DH59 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 REXO1L6P-201ENST00000603433 1515 ntBASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 BTBD6P1-201ENST00000412176 1267 ntBASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 RPS2P32-201ENST00000439199 892 ntBASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC012441.2-201ENST00000444843 739 ntBASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
TRBV5-4A0A0C4DH59 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL591846.1-201ENST00000451736 433 ntBASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC005730.2-201ENST00000564549 1184 ntBASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.47□□□□□ -0.09
TRBV5-4A0A0C4DH59 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 321 ms