Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 AL008718.2-201ENST00000609206 1313 ntBASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CSNK1G3Q9Y6M4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 RN7SL574P-201ENST00000581512 297 ntBASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CSNK1G3Q9Y6M4 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AC126365.1-201ENST00000578585 1514 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 WASH3P-207ENST00000560956 1394 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AL035414.1-201ENST00000451327 857 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AL353637.1-201ENST00000451571 732 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AC012618.1-201ENST00000461223 412 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 VPS18-202ENST00000558474 873 ntTSL 3 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 AC244394.1-201ENST00000435000 1665 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 MROH4P-201ENST00000431302 1578 ntBASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.51□□□□□ -0.09
CSNK1G3Q9Y6M4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CSNK1G3Q9Y6M4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.5□□□□□ -0.09
CSNK1G3Q9Y6M4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CSNK1G3Q9Y6M4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms