Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AC098934.1-203ENST00000442868 1262 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AL135901.1-201ENST00000451812 333 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AC095040.1-201ENST00000513286 675 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 RNA5SP406-201ENST00000516106 112 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 FAM86B3P-203ENST00000523992 854 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 ACE3P-201ENST00000423435 1973 ntBASIC19.8■□□□□ 0.76
PHF8Q9UPP1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC19.8■□□□□ 0.76
PHF8Q9UPP1 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 RN7SL23P-201ENST00000484055 275 ntBASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AL133467.4-201ENST00000602953 725 ntBASIC19.79■□□□□ 0.76
PHF8Q9UPP1 AP001527.2-201ENST00000614441 631 ntBASIC19.79■□□□□ 0.76
PHF8Q9UPP1 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.79■□□□□ 0.76
PHF8Q9UPP1 LINC00244-201ENST00000625073 613 ntBASIC19.79■□□□□ 0.76
PHF8Q9UPP1 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PHF8Q9UPP1 CTBP2P8-201ENST00000422584 1330 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC015688.4-201ENST00000580780 1647 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 COX20P1-201ENST00000366529 357 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SAT1-201ENST00000379251 801 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SAT1-202ENST00000379253 909 ntTSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SAT1-203ENST00000379254 868 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC108734.2-201ENST00000420887 1069 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 GNG10P1-201ENST00000452289 199 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 SCARNA12-201ENST00000459155 270 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 RN7SL494P-201ENST00000461517 304 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC19.78■□□□□ 0.76
PHF8Q9UPP1 AC140658.4-201ENST00000561990 352 ntBASIC19.78■□□□□ 0.76
PHF8Q9UPP1 THY1-209ENST00000580275 578 ntTSL 3 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms