Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
CTSFQ9UBX1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 LINC01101-201ENST00000622953 1884 ntBASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 AC022748.3-201ENST00000621828 275 ntBASIC13.97□□□□□ -0.17
CTSFQ9UBX1 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 AC138028.6-201ENST00000616106 1482 ntBASIC13.97□□□□□ -0.17
CTSFQ9UBX1 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CTSFQ9UBX1 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 RBM38-204ENST00000371219 760 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 FNTAP2-201ENST00000430308 634 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 CALR4P-201ENST00000431943 946 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AKR7A2P1-201ENST00000460134 915 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 HIST2H2BC-201ENST00000498492 580 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 ACTG1P17-201ENST00000558391 1119 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AC132192.2-201ENST00000596206 1147 ntBASIC13.96□□□□□ -0.17
CTSFQ9UBX1 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CTSFQ9UBX1 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms