Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AC023157.3-201ENST00000619086 2088 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AC012441.2-201ENST00000444843 739 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 KLF2P1-201ENST00000447438 1042 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AC022217.1-201ENST00000521069 738 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NDUFV2P1-201ENST00000596415 907 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AP000346.4-201ENST00000614827 381 ntBASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CLCF1Q9UBD9 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AL008718.2-201ENST00000609206 1313 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AC005077.2-201ENST00000449786 690 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AL035414.1-201ENST00000451327 857 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 ADM-202ENST00000524948 584 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SDHD-202ENST00000525291 790 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AL645939.5-201ENST00000606834 243 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 MIR6720-201ENST00000611664 98 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AC027601.3-201ENST00000622907 509 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 Z98259.2-201ENST00000641583 609 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 AC126177.1-201ENST00000547829 2218 ntBASIC13.17□□□□□ -0.3
CLCF1Q9UBD9 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms