Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AHCYP4-201ENST00000419201 1315 ntBASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 PFN2-202ENST00000423691 911 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 RPL17P45-201ENST00000586289 509 ntBASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC007326.1-201ENST00000604539 458 ntBASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 AC139712.1-201ENST00000378256 1875 ntBASIC15.25■□□□□ 0.03
HCFC1R1Q9NWW0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 AC068587.6-202ENST00000641839 5619 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 AC079112.1-201ENST00000454972 939 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 AL109954.1-202ENST00000564051 2148 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 AC009093.10-201ENST00000641956 1442 ntBASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
HCFC1R1Q9NWW0 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
HCFC1R1Q9NWW0 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms